course

Statistical Genetics

Main Lecture

(01/12/2010 PDF)The introduction to Statistical Genetics(PHS516/Stat597E)
(01/12/2010 PPT)The lecture for Statistical Genetics
(02/01/2010 PDF)Population Genetics
(02/08/2010 PDF)Quantitative Genetics
(02/24/2010 PPT)QTL Mapping in Natural Populations
(02/24/2010 PPT)Haplotype Discovery and Modeling
(03/01/2010 PPT)Functional Mapping
(03/01/2010 PDF)Functional Mapping (slightly modified)
(03/29/2010 PDF)Genetic Association
(03/29/2010 PDF)Joint Linkage and LD Mapping
(03/29/2010 PDF)Article Presentation



Homework

(02/08/2010 DOC)Homework 1
(03/02/2010 PDF)Homework 1 Solutions
(02/08/2010 DOC)Homework 2
(03/02/2010 PDF)Homework 2 Solutions
(03/01/2010 DOC)Homework 3 Due date postponed! Due March 23



Computational Slides

(01/21/2010 PDF)Recombination Slides
(02/01/2010 PDF)Lecture 2: Gene Orders
(02/14/2010 PDF) Marker Data
(02/16/2010 PDF) Quantitative Genetics
(03/16/2010 PDF) Composite Interval Mapping



Datasets

(02/16/2010 CSV) Mendel dataset
(02/16/2010 CSV) The data of poplar diameter
(03/14/2010 CSV) poplar marker data
(03/16/2010 CSV) simulated plant data



R Code

(02/01/2010 R) R Source for Lecture 2
(02/14/2010 R) R Functions from Class
(02/16/2010 R) R Functions from Class

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